There has been issues related to orphaned items present in Sharepoint sites. In order to detect and delete the orphaned items you can use the below commands:
Detecting an orphan site
To detect orphaned items :
stsadm -o databaserepair -url http://sharepointsite/ -databasename [name of DB where orphaned site is present]
Deleting an orphan site
To delete orphaned items :
stsadm -o databaserepair -url http://sharepointsite/ -databasename [name of DB where orphaned site is present] -deletecorruption
Reference : http://technet.microsoft.com/en-us/library/cc263282.aspx
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